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The Scratch Assay Explained: Measuring Cells Movement And The Tools Used To Do It
Cut your finger and the wound closes because skin cells crawl inward until they meet. That is cell migration, and the scratch assay is how labs measure it. A plain-language guide to what the experiment does, why it appears in cancer, wound healing and device research, and what changed when its two manual steps became mechanical.
6 days ago5 min read


How to Report Your Statistics in a Methods Section Reviewers Won't Question
Reviewers examining 100 clinical papers found 65% needed revisions just to explain what their statistical tests were for, and 64% had omitted effect sizes entirely. Statistical reporting problems are rarely about running the wrong analysis; they're about not writing down enough for a reader to judge it. Here's what belongs in the section, built on the SAMPL guidelines: seven things to state in your methods, the results formats that draw fewest queries, and a template you can
Sep 45 min read


ANCOVA vs. Multiple Regression: Which One Are You Actually Running?
Run an ANCOVA and a multiple regression on the same data, specified equivalently, and you get the same F, the same p, and the same coefficients. They are one model with two traditions, and dummy coding is the bridge. So the real question isn't which is correct but which framing makes your result clearest. This piece covers why they're equivalent, what genuinely differs, and how to describe your model so reviewers from either tradition can follow it.
Aug 286 min read


How to Run an ANCOVA in GraphPad Prism (and How It Compares to Doing It with Sophie)
Hunted through Prism's Analyze menu for ANCOVA? It isn't there, and GraphPad's own FAQ confirms they've never shipped one. Prism can still do it, through two documented routes most users never find: the simple-linear-regression slopes test for the parallel-slopes assumption, and multiple regression with dummy-coded groups for the adjusted comparison. Here are both step by step, plus an honest comparison with describing the same analysis in plain language instead.
Aug 216 min read


A Researcher's Guide to Multiple Regression for Dose-Response and Covariate Analysis
Most bench scientists reach for a t-test or ANOVA by reflex, but plenty of real experiments have a continuous dose, groups that differ at baseline, or nuisance variation eating the power. Multiple regression handles all three, and ANOVA and ANCOVA turn out to be special cases of it. This guide covers when regression earns its place, how to read coefficients honestly, the two covariate mistakes that invalidate an analysis, and why dose-response needs a 4PL curve, not a line.
Aug 177 min read


ANCOVA Protocol: A Step-by-Step for Comparing Groups While Controlling for a Covariate
Your treated and control wells started at different confluence, so comparing endpoints with a plain ANOVA measures your treatment effect plus the head start. ANCOVA fixes that by adjusting for a continuous covariate, and usually buys power too. This step-by-step ANCOVA protocol runs 24 numbered steps from covariate choice through reporting, with the assumption checks in the order they need to happen, including the parallel-slopes test most people skip.
Aug 127 min read


Technical vs. Biological Replicates: The Pseudo-replication Trap That Sinks Papers
An audit of 200 published animal studies found only 22% had replicated the right thing, and 46% counted repeated measurements of one biological unit as independent samples. That error, pseudoreplication, inflates your n, shrinks your error bars, and manufactures significance that won't replicate. Here's what separates technical vs biological replicates, why the mistake inflates false positives, and what actually counts as a biological replicate in cell culture.
Aug 107 min read


Scratch Assay Imaging Protocol: A Step-by-Step SOP for Analysis-Ready Wound Images
A no-fluff, step-by-step scratch assay imaging protocol for images your software can actually measure. Twenty-six numbered steps take you from pixel calibration and Köhler alignment, through Time 0 capture with locked exposure, to returning to identical fields at later time points. Includes an equipment table, an acceptance-criteria checklist to run before you analyze, and a troubleshooting table mapping every common symptom to the step that fixes it.
Aug 76 min read
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